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1

Mass Spectrometry Methods for Studying Structure and Dynamics of Biological Macromolecules

Konermann, Lars, Vahidi, Siavash, Sowole, Modupeola A.

Journal:

Analytical Chemistry

Year:

2014

Language:

english

File:

PDF, 6.89 MB

english, 2014

2

An allosteric switch regulates Mycobacterium tuberculosis ClpP1P2 protease function as established by cryo-EM and methyl-TROSY NMR

Vahidi, Siavash, Ripstein, Zev A., Juravsky, Jordan B., Rennella, Enrico, Goldberg, Alfred L., Mittermaier, Anthony K., Rubinstein, John L., Kay, Lewis E.

Journal:

Proceedings of the National Academy of Sciences

Year:

2020

File:

PDF, 2.36 MB

2020

3

Characterizing the Structure and Oligomerization of Major Royal Jelly Protein 1 (MRJP1) by Mass Spectrometry and Complementary Biophysical Tools

Mandacaru, Samuel C., do Vale, Luis H. F., Vahidi, Siavash, Xiao, Yiming, Skinner, Owen S., Ricart, Carlos A. O., Kelleher, Neil L., de Sousa, Marcelo Valle, Konermann, Lars

Journal:

Year:

2017

Language:

english

File:

PDF, 1.36 MB

english, 2017

4

Sunlight Degradation of Polymeric Detectable Warning Surface Products

Na, Sukjoon, Vahidi, Siavash, Nguyen, Hieu, ElSafety, Adel, Hsuan, Grace

Journal:

Transportation Research Record Journal of the Transportation Research Board

Year:

2018

Language:

english

File:

PDF, 2.56 MB

english, 2018

5

Protein Folding and Binding Characterized by Mass Spectrometry

Konermann, Lars, Vahidi, Siavash, Sowole, Modupeola A.

Journal:

Biophysical Journal

Year:

2014

Language:

english

File:

PDF, 37 KB

english, 2014

6

Effects of Ammonium Bicarbonate on the Electrospray Mass Spectra of Proteins: Evidence for Bubble-Induced Unfolding

Hedges, Jason B., Vahidi, Siavash, Yue, Xuanfeng, Konermann, Lars

Journal:

Analytical Chemistry

Year:

2013

Language:

english

File:

PDF, 2.12 MB

english, 2013

7

Reconfiguration of Smart Distribution Network in the Presence of Renewable DG’s Using GWO Algorithm

Siavash, M., Pfeifer, C., Rahiminejad, A., Vahidi, B.

Journal:

IOP Conference Series Earth and Environmental Science

Year:

2017

Language:

english

File:

PDF, 994 KB

english, 2017

8

Evidence for a Partially Stalled γ Rotor in F1-ATPase from H/D Exchange Experiments and Molecular Dynamics Simulations

Murcia Rios, Angela, Vahidi, Siavash, Dunn, Stanley D., Konermann, Lars

Journal:

Journal of the American Chemical Society

Year:

2018

Language:

english

File:

PDF, 1.60 MB

english, 2018

9

Insights into the Mechanism of Protein Electrospray Ionization From Salt Adduction Measurements

Yue, Xuanfeng, Vahidi, Siavash, Konermann, Lars

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2014

Language:

english

File:

PDF, 2.87 MB

english, 2014

10

Preconcentration of Lead in Sugar Samples by Solid Phase Extraction and Its Determination by Flame Atomic Absorption Spectrometry

Davarani, Saied Saeed Hosseiny, Sheijooni-Fumani, Neda, Najarian, Amin Morteza, Tabatabaei, Mohammad-Ali, Vahidi, Siavash

Journal:

American Journal of Analytical Chemistry

Year:

2011

Language:

english

File:

PDF, 286 KB

english, 2011

11

Protein Structural Studies by Traveling Wave Ion Mobility Spectrometry: A Critical Look at Electrospray Sources and Calibration Issues

Sun, Yu, Vahidi, Siavash, Sowole, Modupeola A., Konermann, Lars

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2016

Language:

english

File:

PDF, 1.11 MB

english, 2016

12

Changes in Enzyme Structural Dynamics Studied by Hydrogen Exchange-Mass Spectrometry: Ligand Binding Effects or Catalytically Relevant Motions?

Fast, Courtney S., Vahidi, Siavash, Konermann, Lars

Journal:

Analytical Chemistry

Year:

2017

Language:

english

File:

PDF, 3.08 MB

english, 2017

13

Mapping pH-Induced Protein Structural Changes Under Equilibrium Conditions by Pulsed Oxidative Labeling and Mass Spectrometry

Vahidi, Siavash, Stocks, Bradley B., Liaghati-Mobarhan, Yalda, Konermann, Lars

Journal:

Analytical Chemistry

Year:

2012

Language:

english

File:

PDF, 1.58 MB

english, 2012

14

Unraveling the Mechanism of Electrospray Ionization

Konermann, Lars, Ahadi, Elias, Rodriguez, Antony D., Vahidi, Siavash

Journal:

Analytical Chemistry

Year:

2013

Language:

english

File:

PDF, 2.76 MB

english, 2013

15

Submillisecond Protein Folding Events Monitored by Rapid Mixing and Mass Spectrometry-Based Oxidative Labeling

Vahidi, Siavash, Stocks, Bradley B., Liaghati-Mobarhan, Yalda, Konermann, Lars

Journal:

Analytical Chemistry

Year:

2013

Language:

english

File:

PDF, 1.80 MB

english, 2013

16

ClpP protease activation results from the reorganization of the electrostatic interaction networks at the entrance pores

Mabanglo, Mark F., Leung, Elisa, Vahidi, Siavash, Seraphim, Thiago V., Eger, Bryan T., Bryson, Steve, Bhandari, Vaibhav, Zhou, Jin Lin, Mao, Yu-Qian, Rizzolo, Kamran, Barghash, Marim M., Goodreid, Jor

Journal:

Communications Biology

Year:

2019

File:

PDF, 6.86 MB

2019

17

Effects of GTR and Treated GTR on Asphalt Binder and High-RAP Mixtures

Vahidi, Siavash, Mogawer, Walaa S., Booshehrian, Abbas

Journal:

Journal of Materials in Civil Engineering

Year:

2014

Language:

english

File:

PDF, 403 KB

english, 2014

18

Load-dependent destabilization of the γ-rotor shaft in F O F 1 ATP synthase revealed by hydrogen/deuterium-exchange mass spectrometry

Vahidi, Siavash, Bi, Yumin, Dunn, Stanley D., Konermann, Lars

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 1.80 MB

english, 2016

19

Predicting the depletion of antioxidants in high density polyethylene (HDPE) under sunlight using the reciprocity law

Vahidi, Siavash, Hsuan, Grace, ElSafty, Adel

Journal:

Geotextiles and Geomembranes

Year:

2020

Language:

english

File:

PDF, 1.16 MB

english, 2020

20

A pH-Dependent Conformational Switch Controls N. meningitidis ClpP Protease Function

Ripstein, Zev A., Vahidi, Siavash, Rubinstein, John L., Kay, Lewis E.

Journal:

Journal of the American Chemical Society

Year:

2020

File:

PDF, 1.95 MB

2020

21

Electro-organic synthesis of new pyrimidine and uracil derivatives

Saied Saeed Hosseiny Davarani, Neda Sheijooni Fumani, Siavash Vahidi, Mohammad-Ali Tabatabaei, Hamid Arvin-Nezhad

Journal:

Journal of Heterocyclic Chemistry

Year:

2010

Language:

english

File:

PDF, 394 KB

english, 2010

22

Evaluating the effect of rejuvenators on the degree of blending and performance of high RAP, RAS, and RAP/RAS mixtures

Mogawer, Walaa S., Booshehrian, Abbas, Vahidi, Siavash, Austerman, Alexander J.

Journal:

Road Materials and Pavement Design

Year:

2013

Language:

english

File:

PDF, 932 KB

english, 2013

23

[IEEE 2017 18th International Scientific Conference on Electric Power Engineering (EPE) - Kouty nad Desnou, Czech Republic (2017.5.17-2017.5.19)] 2017 18th International Scientific Conference on Electric Power Engineering (EPE) - An application of grey wolf optimizer for optimal power flow of wind integrated power systems

Siavash, Majid, Pfeifer, Christoph, Rahiminejad, Abolfazl, Vahidi, Behrooz

Year:

2017

Language:

english

File:

PDF, 376 KB

english, 2017

24

Probing the Time Scale of FPOP (Fast Photochemical Oxidation of Proteins): Radical Reactions Extend Over Tens of Milliseconds

Vahidi, Siavash, Konermann, Lars

Journal:

Journal of the American Society for Mass Spectrometry

Year:

2016

Language:

english

File:

PDF, 1.36 MB

english, 2016

25

ChemInform Abstract: Electro-Organic Synthesis of New Pyrimidine (III) and Uracil Derivatives (V).

Saied Saeed Hosseiny Davarani, Neda Sheijooni Fumani, Siavash Vahidi, Mohammad-Ali Tabatabaei, Hamid Arvin-Nezhad

Journal:

Year:

2010

File:

PDF, 26 KB

2010

26

Partially Disordered Proteins Studied by Ion Mobility-Mass Spectrometry: Implications for the Preservation of Solution Phase Structure in the Gas Phase

Vahidi, Siavash, Stocks, Bradley B., Konermann, Lars

Journal:

Analytical Chemistry

Year:

2013

Language:

english

File:

PDF, 1.51 MB

english, 2013

27

Reversible inhibition of the ClpP protease via an N-terminal conformational switch

Vahidi, Siavash, Ripstein, Zev A., Bonomi, Massimiliano, Yuwen, Tairan, Mabanglo, Mark F., Juravsky, Jordan B., Rizzolo, Kamran, Velyvis, Algirdas, Houry, Walid A., Vendruscolo, Michele, Rubinstein, J

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.81 MB

english, 2018

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